Author Archives: aggregator

About aggregator

Purpose: used to automatically import posts via xmlrpc

eFetchPmcService

By | September 22, 2011

The EFetch services retrieve records in the requested format from several databases hosted by the NCBI.

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WSCensor

By | September 22, 2011

CENSOR screens sequences against a reference collection of sequence repeats, “censors” (masks) homologous portions with masking symbols and generates a [...]

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WSDbfetch (RPC/encoded SOAP)

By | September 22, 2011

This service has moved. Please see http://www.biocatalogue.org/services/2701 for details of the current RPC/encoded SOAP service. An equivalent document/literal SOAP interface [...]

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WSInterProScan

By | September 22, 2011

WSInterProScan: protein domain and family signature searches (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). Note: this RPC/encoded SOAP service was decommissioned on Monday 28th March [...]

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TfscanService

By | September 22, 2011

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ClustalW

By | September 22, 2011

ClustalW is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence alignments [...]

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BLAST (DDBJ)

By | September 22, 2011

Uses the DDBJ’s UniProt BLAST service that forms part of its Web API for Bioinformatics pages.

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DDBJ

By | September 22, 2011

Retrieve DDBJ entry. DDBJ (DNA Data Bank of Japan) is one of three summit databanks that construct DDBJ/EMBL/GenBank International Nucleotide [...]

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GetEntry — Data retrieval by accession numbers etc — (DDBJ)

By | September 22, 2011

  Service Description “getentry” provides an easy way to retrieve entries from various databases at DDBJ. Please see also the [...]

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KEGG

By | September 22, 2011

KEGG (Kyoto Encyclopedia of Genes and Genomes) is a database of biological systems, consisting of genetic building blocks of genes [...]

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