Directory

Filter by
  • Show entries

NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
FASTA (REST)

FASTA (pronounced FAST-Aye) stands for FAST-All, reflecting the fact that it can be used for a fast protein comparison or [...]

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis REST
FASTA (SOAP)

FASTA (pronounced FAST-AYE) stands for FAST-All, reflecting the fact that it can be used for a fast protein comparison or [...]

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis SOAP
FASTM (REST)

The FASTA (pronounced FAST-Aye) suite of programs includes three specialist programs for searching protein databases with a set of short [...]

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis REST
FASTM (SOAP)

The FASTA (pronounced FAST-Aye) suite of programs includes three specialist programs for searching protein databases with a set of short [...]

Protein Sequence Similarity Analysis SOAP
GenesilicoProteinSilicoSOAPService Domains, Protein Pairwise Alignment, Protein Sequence Analysis, Protein Sequence Similarity, Sequence Analysis Analysis SOAP
HMMER

HMMER is a software suite for protein sequence similarity searches using probabilistic methods. We have implemented several of the methods [...]

Domains, Motifs, Protein Multiple Alignment, Protein Pairwise Alignment, Protein Sequence Similarity, Repeats Analysis REST
MRS Blast service

MRS Blast is a companion service for the text based MRS service. You can use it to blast against protein [...]

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis SOAP
NCBI BLAST (REST)

NCBI BLAST is a sequence similarity search program. The emphasis is to find regions of sequence similarity, which will yield [...]

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis REST
NCBI BLAST (SOAP)

NCBI BLAST is a sequence similarity search program. The emphasis is to find regions of sequence similarity, which will yield [...]

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis SOAP
PDB

The RCSB-PDB provides a number of different SOAP based web services. RESTful services are in preparation.

Biology, Protein Sequence Similarity Analysis, Data Retrieval SOAP
phosphoELMdb

This WSDL file describe the phospho.ELM database Web Service. The phospho.ELM database contains descriptions of sets of one or more [...]

Ligand Interaction, Motifs, Protein Interaction, Protein Sequence Similarity Analysis SOAP
PSI-BLAST (REST)

Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) [...]

Protein Sequence Similarity Analysis REST
PSI-BLAST (SOAP)

Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) [...]

Protein Sequence Similarity Analysis SOAP
PSI-BLAST at SIB (protein query sequence against protein database, low similarity, iterative process)

psiBLAST finds regions of low similarity between peptides (Position-Specific Iterated BLAST). Computations are done on the Vital-IT cluster (SIB). Most [...]

Protein Sequence Similarity Analysis SOAP
PSI-Search (REST)

Similar to PSI-BLAST, PSI-Search uses SSEARCH to perform a rigorous Smith & Waterman search of a protein database. From the [...]

Protein Sequence Similarity Analysis REST
PSI-Search (SOAP)

Similar to PSI-BLAST, PSI-Search uses SSEARCH to perform a rigorous Smith & Waterman search of a protein database. From the [...]

Protein Sequence Similarity Analysis SOAP
tBLASTn at SIB (protein query sequence(s) against a nucleotide sequence database dynamically translated in all reading frames)

tBLASTn finds regions of similarity between a protein query sequence and a nucleotide sequence database dynamically translated in all reading [...]

Protein Sequence Similarity Analysis SOAP
tBLASTx at SIB (nucleotide query sequence(s) against a nucleotide sequence dabase, both six-frame translated)

tBLASTx finds regions of similarity between the six-frame translations of a nucleotide query sequence and the six-frame translations of a [...]

Protein Sequence Similarity Analysis SOAP
TimelogicblastgtService

— date: 17:19:5917 April 2006 xmlns:date: http://exslt.org/dates-and-times version: f53e569b044688f80ca250b00447baed

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis SOAP
TimelogicblastService

— date: 8:53:1414 August 2006 xmlns:date: http://exslt.org/dates-and-times version: 526974d417e2d44c14dd2989a4ae931d

Nucleotide Sequence Similarity, Protein Sequence Similarity Analysis SOAP

Showing 21 to 40 of 51 entries