Directory
| Name | Short Description | Topic | Type | Protocol |
|---|---|---|---|---|
| Name | Short Description | Topic | Type | Protocol |
| CATH/Gene3D HMMScan (draft WSDL) | This service allows the CATH and Gene3D HMM libraries to be searched with a given amino acid sequence (or any [...] |
Protein Structure Prediction, Protein Tertiary Structure | Analysis | SOAP |
| CATHEDRAL (Draft WSDL) | This service allows the CATH database to be searched by protein structure. NB This service is not currently active. It [...] |
Protein Structure Prediction, Protein Tertiary Structure | Analysis | SOAP |
| COILS predict protein coiled-coil regions (CNRS IBCP) | Coils @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Tertiary Structure | Analysis | SOAP |
| EMBOSS psiphi | Calculates phi and psi torsion angles from protein coordinates |
Protein Tertiary Structure | Analysis | SOAP, Soaplab |
| EMBOSS rocon | Generates a hits file from comparing two DHF files |
Domains, Protein Tertiary Structure | Analysis | SOAP, Soaplab |
| EMBOSS sigscan | Generates hits (DHF file) from a signature search |
Domains, Protein Tertiary Structure | Analysis | SOAP, Soaplab |
| Pcons | Pcons is a Model Quality Assessment Program (MQAP) this means that it ranks protein models by assessing their quality. Pcons [...] |
Protein Tertiary Structure | Analysis | SOAP |
| PDB | RESTful interface to search and retrieve data from the Protein Data Bank (PDB). The Protein Data Bank is the single [...] |
Biology, Protein Tertiary Structure | Analysis, Data Retrieval | REST |
| ShiftPredictionByPDBfileService | Authority: ualberta.ca – predicts 1H, 13C, and 15N protein chemical shifts using the 3D structure (PDB coordinates) of the protein [...] |
Protein Tertiary Structure | Analysis | SOAP |
| WSMaxsprout | Generate protein backbone and side chain co-ordinates from a C(alpha) trace in PDB format using the MaxSprout program. |
Protein Tertiary Structure | Analysis | SOAP |
