Filter by
  • Show entries

NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
CATH/Gene3D Database Lookup Services

The CATH/Gene3D Database lookup service provides an interface that exposes the backend CATH/Gene3D databases to simple lookup queries. This enables [...]

Biology, Domains, Pathways Analysis, Data Retrieval SOAP

— service_documentation: sample_client: __content__: reference: __content__: A tree-based conservation scoring method for short linear motifs in multiple alignments of [...]

Motifs, Protein Sequence Analysis Analysis SOAP
Drug susceptibility prediction for HIV Protease strains

This Web service predicts the susceptibility for one or more mutations in HIV protease to seven drugs (amprenavir, atazanavir, indinavir, [...]

Function Prediction, Sequence Analysis Analysis REST

— service_documentation: sample_client: __content__: reference: __content__: “ELM server: a new resource for investigating short functional sites in modular eukaryotic [...]

Function Prediction, Ligand Interaction, Motifs, Pathways, Protein Interaction, Protein Sequence Analysis, Protein Sequence Similarity Analysis SOAP
EMBOSS helixturnhelix

Identify nucleic acid-binding motifs in protein sequences

Domains, Motifs, Protein Secondary Structure Analysis SOAP, Soaplab
EMBOSS rocon

Generates a hits file from comparing two DHF files

Domains, Protein Tertiary Structure Analysis SOAP, Soaplab
EMBOSS sigscan

Generates hits (DHF file) from a signature search

Domains, Protein Tertiary Structure Analysis SOAP, Soaplab

GENe AnaloGue FINdEr (ENGINE) uses semantic similarity between GO terms to score proteins for similarity of function. Even if two [...]

Biology, Function Prediction Analysis, Ontology SOAP

fetchProDom is a set of five different webservices that interrogates the ProDom database. fetchdom: Enter one or several (separated by [...]

Domains Analysis SOAP

FuncNet is a distributed protein function comparison pipeline, funded by the European Union’s EMBRACE Network of Excellence. The objective of [...]

Function Prediction Analysis SOAP

Geneslico SOAP service for protein sequence analysis, which involve – secondary structure prediction – domain prediction – disorder prediction – [...]

Domains, Ligand Interaction, Protein Secondary Structure, Protein Sequence Analysis Analysis SOAP
GenesilicoProteinSilicoSOAPService Domains, Protein Pairwise Alignment, Protein Sequence Analysis, Protein Sequence Similarity, Sequence Analysis Analysis SOAP

This WSDL file describe the GlobPlot Web Service. It performs intrinsic protein disorder, domain and globularity prediction. GlobPlot: Exploring Protein [...]

Domains Analysis SOAP

hmmalign: align sequences to a profile HMM

Motifs, Sequence Analysis Analysis SOAP

hmmbuild: profile HMM construction from multiple sequence alignments

Motifs, Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP

hmmconvert: convert profile file to a HMMER format

Motifs Analysis SOAP

sample sequence(s) from a profile HMM

Motifs Analysis SOAP

HMMER is a software suite for protein sequence similarity searches using probabilistic methods. We have implemented several of the methods [...]

Domains, Motifs, Protein Multiple Alignment, Protein Pairwise Alignment, Protein Sequence Similarity, Repeats Analysis REST

retrieve profile HMM(s) from a file

Motifs Analysis SOAP

search sequence(s) against a profile database

Motifs, Sequence Analysis Analysis SOAP

Showing 1 to 20 of 44 entries