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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
AlignSequences

AlignSequences is a Web Service to compute an alignment between RNA sequences described with the FASTA or VIENNA file format.

Nucleotide Multiple Alignment Analysis REST
ClustalW

ClustalW is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence alignments [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
ClustalW2 (REST)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST
ClustalW2 (SOAP)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
DCAImplementationService

Divide-and-Conquer Multiple Sequence Alignment (DCA) is a program for producing fast, high quality simultaneous multiple sequence alignments (http://bibiserv.techfak.uni-bielefeld.de/dca/alignments/) of amino [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
EMBOSS emma

Multiple sequence alignment (ClustalW wrapper)

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP, Soaplab
EMBOSS matcher (REST)

Pairwise sequence alignment of DNA or protein sequences using Waterman-Eggert local alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis REST
EMBOSS matcher (SOAP)

Pairwise sequence alignment of DNA or protein sequences using Waterman-Eggert local alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis SOAP
EMBOSS needle (REST)

Pairwise sequence alignment of DNA or protein sequences using Needleman-Wunsch global alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis REST
EMBOSS needle (SOAP)

Pairwise sequence alignment of DNA or protein sequences using Needleman-Wunsch global alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis SOAP
EMBOSS stretcher (REST)

Pairwise sequence alignment of DNA or protein sequences using Myers and Miller global alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis REST
EMBOSS stretcher (SOAP)

Pairwise sequence alignment of DNA or protein sequences using Myers and Miller global alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis SOAP
EMBOSS water (REST)

Pairwise sequence alignment of DNA or protein sequences using Smith-Waterman local alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis REST
EMBOSS water (SOAP)

Pairwise sequence alignment of DNA or protein sequences using Smith-Waterman local alignment.

Nucleotide Pairwise Alignment, Protein Pairwise Alignment Analysis SOAP
EstgenomeService

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Genomics, Nucleotide Sequence Alignment Analysis SOAP
gassst

Web interface available at http://gassst.genouest.org

Nucleotide Multiple Alignment Analysis SOAP
hmmbuild

hmmbuild: profile HMM construction from multiple sequence alignments

Motifs, Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
infoalignService

Display basic information about a multiple sequence alignment

Nucleotide Sequence Alignment, Protein Sequence Alignment Analysis SOAP, Soaplab
Kalign (REST)

Kalign is a fast and accurate multiple sequence alignment algorithm for DNA and protein sequences.

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST
Kalign (SOAP)

Multiple sequence alignment using Kalign, a fast and accurate multiple sequence alignment algorithm. Kalign homepage: http://msa.sbc.su.se/

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP

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