Directory
| Name | Short Description | Topic | Type | Protocol |
|---|---|---|---|---|
| Name | Short Description | Topic | Type | Protocol |
| BinarySearchService | THIS SERVICE IS NOW DEPRECATED. Use the PSICQUIC Web Service to retrieve data programmatically from IntAct: http://www.biocatalogue.org/services/2078-psicquicservice_821400 |
Protein Interaction | Analysis | SOAP |
| BINDService | Allow access to BIND (Biomolecular Interaction Network Database) interaction, molecular complex, and pathway data. Note that the BIND database is [...] |
Protein Interaction | Analysis | SOAP |
| BioGrid PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | REST |
| BioGrid PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | SOAP |
| ChEMBL PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Biochemistry, Pathways, Protein Interaction | Analysis | REST |
| ChEMBL PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Biochemistry, Pathways, Protein Interaction | Analysis | SOAP |
| ConsensusPathDB (CPDB) | ConsensusPathDB (CPDB) is a database that integrates pathway and other functional interaction resources like Reactome, HumanCyc, IntAct, Pathway Interaction Database [...] |
Biology, Protein Interaction | Analysis, Data Retrieval | SOAP |
| EB-eye | High-performance, full-featured text searches across all EBI databases or in selected databases. Also provides methods for navigating between the databases [...] |
Biology, Comparative Genomics, Functional Genomics, Genome Annotation, Genomics, Ligand Interaction, Microarrays, Pathways, Protein Interaction, Proteomics, Structural Genomics | Analysis, Data Retrieval, Identifier, Literature, Ontology, Ontology Lookup, System Engineering | SOAP |
| ELMdb | — service_documentation: sample_client: __content__: http://api.bioinfo.no/clients/ELMdb.py reference: __content__: “ELM server: a new resource for investigating short functional sites in modular eukaryotic [...] |
Function Prediction, Ligand Interaction, Motifs, Pathways, Protein Interaction, Protein Sequence Analysis, Protein Sequence Similarity | Analysis | SOAP |
| GavinSpokeService | Authority: llama.med.harvard.edu – Protein-protein interactions using spoke model (direct bait-prey interactions only), by Gavin et al. |
Protein Interaction | Analysis | SOAP |
| IntAct PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | REST |
| IntAct PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | SOAP |
| iRefIndex PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Protein Interaction | Analysis | REST |
| LCIService | Authority: llama.med.harvard.edu – Protein-protein interactions supported by a least one co-occurrence in literature, as included in work of Rual et [...] |
Protein Interaction | Analysis | SOAP |
| MatrixDB PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | REST |
| MatrixDB PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | SOAP |
| MINT PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | REST |
| MINT PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | SOAP |
| MPIDB PSICQUIC Service | PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...] |
Pathways, Protein Interaction | Analysis | SOAP |
| phosphoELMdb | This WSDL file describe the phospho.ELM database Web Service. The phospho.ELM database contains descriptions of sets of one or more [...] |
Ligand Interaction, Motifs, Protein Interaction, Protein Sequence Similarity | Analysis | SOAP |
