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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol

Search for distinct expanded forms of acronyms from MEDLINE. Based on your location, you may need to request access to [...]

General Text Mining SOAP

Named Entity Recognition based on Conditional Random Fields method (Machine Learning). This service can be used to extract protein names [...]

General Named Entity Recognition SOAP
Article section text classifier

This service provides 2 operations that can be used to classify a piece of text into one of the standard [...]

General Text Mining SOAP
Auto-Complete Neuroscience Terms

Search terms starting for the query used for auto-complete service.

Biology, General Named Entity Recognition, Ontology, Ontology Lookup REST

Identifier mapping service for genes and proteins from multiple species, and for metabolites. Can translate single identifiers, batches of identifiers, [...]

Biology, General, Microarrays Analysis, Identifier, Named Entity Recognition REST

Citedin finds where you are cited! Some of your papers may have been mentioned where you didn’t expect that to [...]

Biology, General Document Discovery, Identifier, Literature REST
CRONOS: the cross-reference navigation server

MOTIVATION: Cross-mapping of gene and protein identifiers between different databases is a tedious and time-consuming task. To overcome this, we [...]

General Text Mining SOAP

Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may [...]

Biology, General Data Retrieval, Document Discovery, Identifier, Literature SOAP

This service takes in a document containg text and extracts all scientific terms. These terms represent a profile for the [...]

Biology, General Literature, Text Mining SOAP
iHOP web services

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General Text Mining SOAP

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Biology, General Literature, Text Mining SOAP

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Biology, General Literature, Text Mining SOAP
MRS Text Search and Sequence Retrieval

MRS is a service that provides text search and retrieval services on many large databanks including UniProt and EMBL. The [...]

General Document Discovery, Document Similarity, Named Entity Recognition, Text Mining SOAP
PDF to text

This service will extract the text content from a PDF file. It uses the pdftotext executable from Xpdf ( The [...]

General Text Mining SOAP
Search MIRIAM annotations

Search for MIRIAM URNs that can be used for annotation. Return formats are human, json and xml. Please read our [...]

Biology, General Named Entity Recognition, Ontology Lookup, System Engineering REST

With this service one can retrieve (references to) documents from a Lucene index, such as from MedLine. Use > [...]

Biology, General Literature, Text Mining SOAP
Sentence Annotator

This is a simple Sentence Splitter service. It is a UIMA applications that uses the Apache SimpleServer that makes results [...]

General Text Mining REST
Sentence splitter service

This service accepts a text string and will attempt to split it into sentences. The sentences are returned as an [...]

General Text Mining SOAP

Input some source text and retrieve a list of terms discovered, ranked by their importance within the text.

General Text Mining SOAP

TexFlame renders a single PubMed abstract into a graphical representation derived from the Systems Biology Graphical Notation (SBGN). The graph [...]

General Text Mining REST

Showing 1 to 20 of 24 entries