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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
ARSA

Keyword search system against over 20 life sciences databases developed by DDBJ

Biology Data Retrieval, Identifier, Literature SOAP
BridgeRest

Identifier mapping service for genes and proteins from multiple species, and for metabolites. Can translate single identifiers, batches of identifiers, [...]

Biology, General, Microarrays Analysis, Identifier, Named Entity Recognition REST
citedin

Citedin finds where you are cited! Some of your papers may have been mentioned where you didn’t expect that to [...]

Biology, General Document Discovery, Identifier, Literature REST
DDBJ_ddbj

Retrieve DDBJ entry The DNA Data Bank of Japan (DDBJ) is one of three summit databanks that construct DDBJ/EMBL/GenBank International [...]

Biology Data Retrieval, Identifier REST
DDBJ_GetEntry

Provides an easy way to retrieve entries from various databases at DDBJ. SOAP variant: http://www.biocatalogue.org/services/10

Biology Data Retrieval, Identifier REST
DDBJ_GIB

GIB (Genome Information Broker) is the comprehensive data repository of complete microbial genomes in the public domain. The service allows [...]

Biology Data Retrieval, Identifier REST
DDBJ_GTOP

GTOP is a database built by the Laboratory of Gene-product Informatics at the National Institute of Genetics consisting of data [...]

Biology Data Retrieval, Identifier REST
DDBJ_GTPS

“GTPS” is acronym of Gene Trek in Procaryote Space. Various complete genomes of eubacteria and archaea have been registered in [...]

Biology Data Retrieval, Identifier REST
e-Fungi

Allows access and the retrieval of information from the e-Fungi warehouse, an integrated data from multiple fungal genomes.

Biology Data Retrieval, Identifier SOAP
EB-eye

High-performance, full-featured text searches across all EBI databases or in selected databases. Also provides methods for navigating between the databases [...]

Biology, Comparative Genomics, Functional Genomics, Genome Annotation, Genomics, Ligand Interaction, Microarrays, Pathways, Protein Interaction, Proteomics, Structural Genomics Analysis, Data Retrieval, Identifier, Literature, Ontology, Ontology Lookup, System Engineering SOAP
Ensembl

This service allows you to access Ensembl. Ensembl is a joint project between EMBL – EBI and the Sanger Institute [...]

Biology Data Retrieval, Identifier SOAP
eUtils

Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may [...]

Biology, General Data Retrieval, Document Discovery, Identifier, Literature SOAP
GeNS

The Genomic Name Server is an innovative data integration system that incorporates a large set of heterogeneous biological data under [...]

Biology Identifier SOAP
getColiCardIDs_by_PDBidService

Authority: ualberta.ca – Given a PDB identifier, gets ColiCard identifiers for genes whose gene products have a structure as described [...]

Biology Identifier SOAP
getNASCArraysReferenceNumberByExperimentNameService

Authority: arabidopsis.info – Retrieves the NASCArrays reference number for a given NASCArrays experiment name from NASCArrays, Nottingham Arabidopsis Stock Centre’s [...]

Biology, Microarrays Analysis, Identifier SOAP
getNASCArraysReferenceNumberByNASCstockCodeService

Authority: arabidopsis.info – Retrieves the NASCArrays reference number for a given NASC stock code from NASCArrays, Nottingham Arabidopsis Stock Centre’s [...]

Biology, Microarrays Analysis, Identifier SOAP
getNASCArraysReferenceNumberBySlideNameService

Authority: arabidopsis.info – Retrieves NASCArrays reference number for a given slide name from NASCArrays, Nottingham Arabidopsis Stock Centre’s microarray database [...]

Biology, Microarrays Analysis, Identifier SOAP
Gib

GIB (Genome Information Broker) is the comprehensive data repository of complete microbial genomes in the public domain.

Biology Data Retrieval, Identifier SOAP
GIBV

Genome Information Broker for Viruses (GIB-V) is a complete virus genome database. Website: http://gib-v.genes.nig.ac.jp/

Biology Data Retrieval, Identifier SOAP
Gtop

Get a detail information by gene and organism from the Genome To Protein (GTOP) database. GTOP is a database consisting [...]

Biology Data Retrieval, Identifier SOAP

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