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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
Auto-Complete Neuroscience Terms

Search terms starting for the query used for auto-complete service.

Biology, General Named Entity Recognition, Ontology, Ontology Lookup REST
Bio2RDF GO SPARQL endpoint

Bio2RDF SOAP services for GO SPARQL endpoint

Biology Ontology Lookup SOAP
DDBJ_GO

The Gene Ontology project provides a controlled vocabulary to describe gene and gene product attributes in any organism. The service [...]

Biology Ontology Annotation, Ontology Lookup REST
Display information about a particular ontology

Signature: ./ontologies/detail/{OntologyName} Return: one ontology entry. Example link: http://nif-services.neuinfo.org/ontoquest/ontologies/detail/NIF

Biology Ontology, Ontology Annotation, Ontology Lookup REST
Download a specific version of an ontology from BioPortal

This call enables the download of a specific version of an ontology from BioPortal. The full parameterized URL is http://rest.bioontology.org/bioportal/ontologies/download/39002, [...]

Biology Ontology Lookup REST
Download an ontology file: Download the file (.owl) corresponding to the given ontology

Signature: ./ontologies/download/{OntologyName} Return: the owl file. Example link: http://nif-services.neuinfo.org/ontoquest/ontologies/download/NIF

Biology Ontology, Ontology Annotation, Ontology Lookup REST
EB-eye

High-performance, full-featured text searches across all EBI databases or in selected databases. Also provides methods for navigating between the databases [...]

Biology, Comparative Genomics, Functional Genomics, Genome Annotation, Genomics, Ligand Interaction, Microarrays, Pathways, Protein Interaction, Proteomics, Structural Genomics Analysis, Data Retrieval, Identifier, Literature, Ontology, Ontology Lookup, System Engineering SOAP
Get Concept Details

Given an concept name it returns an object including concept id, name (a.k.a. NIFSTD_ID), pref_label, description/comments, list of synonyms. Signatures: [...]

Biology Data Retrieval, Ontology, Ontology Annotation, Ontology Lookup REST
Get latest version of an ontology id

List the metadata for the latest version of an ontology based on the virtual identifier. The virtual identifier is the [...]

Biology Ontology Lookup REST
GO

Retrieve tree information by GO ID. The Gene Ontology (GO) project provides a controlled vocabulary to describe gene and gene [...]

Biology Ontology Lookup SOAP
Hierarchy Web services

REST Web service to get parents, children or siblings of an ontology term from a BioPortal ontology.

Biology Ontology Lookup REST
Integr8ImplService

Provides programmatic access to a subset of the data available from the Integr8 Web Portal ( http://www.ebi.ac.uk/integr8/EBI-Integr8-HomePage.do?currentclicked=HOME ) . Access [...]

Biology, Genomics, Proteomics Analysis, Data Retrieval, Ontology Lookup SOAP
List metadata for all versions of a given ontology in BioPortal

This call returns the metadata for all versions of an ontology in BioPortal given the ontology identifier as a parameter. [...]

Biology Ontology Lookup REST
List Ontologies

This service returns the Ontologies registered on the NIF Ontoquest Server.

Biology Ontology, Ontology Annotation, Ontology Lookup REST
List the latest version of all ontologies

This call lists the latest version of all ontologies in BioPortal.

Biology Ontology Lookup REST
QueryService

The Ontology Lookup Service is a spin-off of the PRIDE project, which required a centralized query interface for ontology and [...]

Biology Ontology Lookup SOAP
RxNorm API

The RxNorm API is a web service for accessing the current RxNorm data set from your program via SOAP/WSDL. It [...]

Biology Ontology Lookup SOAP
SBOProviderService

The Systems Biology Ontology project (SBO) goal is to develop controlled vocabularies and ontologies tailored specifically for the kinds of [...]

Biology Ontology Annotation, Ontology Lookup, System Engineering SOAP
SBOProviderService

The Systems Biology Ontology project (SBO) goal is to develop controlled vocabularies and ontologies tailored specifically for the kinds of [...]

Biology Ontology Annotation, Ontology Lookup, System Engineering SOAP
Search MIRIAM annotations

Search for MIRIAM URNs that can be used for annotation. Return formats are human, json and xml. Please read our [...]

Biology, General Named Entity Recognition, Ontology Lookup, System Engineering REST

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