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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol

BioModels Database ( is a data resource that allows biologists to store, search and retrieve published mathematical models of biological [...]

Biology Model Analysis, Model Creation, System Engineering SOAP

Analyzes and validates the consistency of regulatory networks with respect to a gene expression profile

Biology Model Analysis SOAP
Find Similar BioModels

Model similarity search based on MIRIAM annotations. The result are BioModels similar the inserted BioModel id or the lists of [...]

Biology, Pathways Analysis, Model Analysis, System Engineering REST
Kaplan Meier Plotter

The KM plotter is capable to assess the effect of 22,277 genes on survival in 1908 breast cancer patients. The [...]

Biology, Comparative Genomics, Functional Genomics, Genomics, Microarrays Analysis, Model Analysis, Statistics, System Engineering REST
SBSI parameter optimization web service

Restful Web service for submitting, tracking and downloading results of parameter fittings of SBML models to experimental data. See [...]

Biology Model Analysis, System Engineering REST

This service provides methods to validate simulation descriptions encoded in the SED-ML standard format ( The service provides 4 operations: [...]

Biology Model Analysis, System Engineering SOAP

Set of Web service (WS) operations prepared for use in the Taverna Workbench. Target application area is the System Biology [...]

Biology Model Analysis, Model Execution SOAP

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