PSI-BLAST (SOAP)

By | September 22, 2011

Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) profile is constructed from set of BLAST alignments. The PSSM is then used to search the database in subsequent iterations allowing the detection of distant evolutionary relationships.

Name
PSI-BLAST (SOAP)
Documentation
http://www.ebi.ac.uk/Tools/webservices/services/sss/psiblast_soap
Protocol
SOAP
WSDL
Endpoint
http://www.ebi.ac.uk/Tools/services/soap/psiblast
Topic
Protein Sequence Similarity
Type
Analysis
Tags
, , , , , , , ,
Description

Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) [...]

Further information

Position Specific Iterative BLAST (PSI-BLAST) refers to a feature of NCBI BLAST 2.0 in which a position-specific scoring matrix (PSSM) profile is constructed from set of BLAST alignments. The PSSM is then used to search the database in subsequent iterations allowing the detection of distant evolutionary relationships.

Original source
BioCatalogue

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