iRefIndex PSICQUIC Service

By | September 22, 2011

PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically.
This specific implementation provides remote access to the iRefIndex database, at the University of Oslo.

Additional details on iRefIndex are available at http://irefindex.uio.no

Documentation on the iRefIndex PSICQUIC service is at

http://irefindex.uio.no/wiki/README_PSICQUIC_web_services_for_iRefIndex

The entire iRefIndex dataset in MITAB2.6 format can be downloaded via FTP.
Not all columns in this format are returned by the current implementation of PSICQUIC.
See http://irefindex.uio.no/wiki/iRefIndex#iRefIndex_availability_via_download

Name
iRefIndex PSICQUIC Service
Documentation
http://code.google.com/p/psicquic/wiki/RestAccess
An example URL (maximum of 20 interactions involving akap1) http://irefindex.uio.no:8080/psicquic-ws/webservices/current/search/query/aliasA:%22akap1%22%20OR%20aliasB:%22akap1%22
Protocol
REST
WSDL
Endpoint
http://irefindex.uio.no:8080/psicquic-ws/webservices/current/search/version
Topic
Protein Interaction
Type
Analysis
Tags
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Description

PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically. [...]

Further information

PSICQUIC is an effort from the HUPO Proteomics Standard Initiative (HUPO-PSI) to standardise the access to molecular interaction databases programmatically.
This specific implementation provides remote access to the iRefIndex database, at the University of Oslo.

Additional details on iRefIndex are available at http://irefindex.uio.no

Documentation on the iRefIndex PSICQUIC service is at

http://irefindex.uio.no/wiki/README_PSICQUIC_web_services_for_iRefIndex

The entire iRefIndex dataset in MITAB2.6 format can be downloaded via FTP.
Not all columns in this format are returned by the current implementation of PSICQUIC.
See http://irefindex.uio.no/wiki/iRefIndex#iRefIndex_availability_via_download

Original source
BioCatalogue

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