CODA (using CATH domains)
By aggregator | September 22, 2011
CODA predicts functional relationships between dissimilar proteins which have domains found in one protein in another species.
This version of CODA uses CATH domains (http://cathdb.info).
It has one operation: ScorePairwiseRelations
This takes two lists of proteins (UniProt primary accession IDs) and returns pairs which are predicted to be functionally related.
CODA is a component of the FuncNet function prediction pipeline. For more information, including sample requests, see http://funcnet.eu/
- Name
- CODA (using CATH domains)
- Documentation
- http://funcnet.eu/
- Protocol
- SOAP
- WSDL
- Endpoint
- http://funcnet.eu/BioMiner-war/services/GossMfService
- Topic
- Functional Genomics
- Type
- Analysis
- Tags
- comparison, domain architecture, domain fission, domain fusion, evolution, FuncNet, function, prediction, protein, sequence
- Description
CODA predicts functional relationships between dissimilar proteins which have domains found in one protein in another species. This version of [...]
- Further information
CODA predicts functional relationships between dissimilar proteins which have domains found in one protein in another species.
This version of CODA uses CATH domains (http://cathdb.info).
It has one operation: ScorePairwiseRelations
This takes two lists of proteins (UniProt primary accession IDs) and returns pairs which are predicted to be functionally related.
CODA is a component of the FuncNet function prediction pipeline. For more information, including sample requests, see http://funcnet.eu/
- Original source
- BioCatalogue
