MegaBlast at SIB

By | September 22, 2011

megaBLAST finds regions of high similarity between a nucleotide query sequence and a nucleotide sequence database.
Computations are done on the Vital-IT cluster (SIB).
Most NCBI BLAST (2.2.17) options are available.
Most SIB databases are available: STS, EST, HTG, refseq, repbase, …

INPUT: nucleotide sequence(s) + choose a database
OUTPUT: BLAST output

Name
MegaBlast at SIB
Documentation
http://ch.embnet.org/software/aBLAST.html
Protocol
SOAP
WSDL
Endpoint
http://wsembnet.vital-it.ch/soaplab2-axis/services/embnet.megablast
Topic
Nucleotide Sequence Similarity
Type
Analysis
Tags
, , , , , , , , , ,
Description

megaBLAST finds regions of high similarity between a nucleotide query sequence and a nucleotide sequence database. Computations are done on [...]

Further information

megaBLAST finds regions of high similarity between a nucleotide query sequence and a nucleotide sequence database.
Computations are done on the Vital-IT cluster (SIB).
Most NCBI BLAST (2.2.17) options are available.
Most SIB databases are available: STS, EST, HTG, refseq, repbase, …

INPUT: nucleotide sequence(s) + choose a database
OUTPUT: BLAST output

Original source
BioCatalogue

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