The ELM Resource Structure Filter

By | September 22, 2011

This WSDL file describe the Structure Filter Web Service.
This web service is useful for evaluating the location of candidate short regulatory sequences in proteins (linear motifs)
which need to be accessible to interact with their ligand domains. The StructureFilter web-service calculates an accessibility
score, secondary structure score and total score (as well as various other features) for each match of a regular expression or
ELM in the query sequence for which structural information is available. (If a regular expression match is determined as having
no associated structural information available, no reference is made to this match in the result set.)

A structure filter for the Eukaryotic Linear Motif Resource. Allegra Via, Cathryn M Gould, Christine Gemuend, Toby J Gibson and
Manuela Helmer-Citterich. (BMC Bioinformatics, 2009, in review)

http://structurefilter.embl.de/webservice/clients/structureFilterClient.txt

Name
The ELM Resource Structure Filter
Documentation
Protocol
SOAP
WSDL
Endpoint
http://luna.embl.de:8080/axis2/services/StructureFilter
Topic
Biology
Type
Tags
, , , , , , , , ,
Description

This WSDL file describe the Structure Filter Web Service. This web service is useful for evaluating the location of candidate [...]

Further information

This WSDL file describe the Structure Filter Web Service.
This web service is useful for evaluating the location of candidate short regulatory sequences in proteins (linear motifs)
which need to be accessible to interact with their ligand domains. The StructureFilter web-service calculates an accessibility
score, secondary structure score and total score (as well as various other features) for each match of a regular expression or
ELM in the query sequence for which structural information is available. (If a regular expression match is determined as having
no associated structural information available, no reference is made to this match in the result set.)

A structure filter for the Eukaryotic Linear Motif Resource. Allegra Via, Cathryn M Gould, Christine Gemuend, Toby J Gibson and
Manuela Helmer-Citterich. (BMC Bioinformatics, 2009, in review)

http://structurefilter.embl.de/webservice/clients/structureFilterClient.txt

Original source
BioCatalogue

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