RNAStructAlignmentMLImplementationService

By | September 22, 2011

The service converts and reverts aligned RNA sequences in alignedDotBracketFasta format to an RNAStructAlignmentML XMLDocument.
AlignedDotBracketFasta is a format to cobine multiple sequences with secondary structures in one string. It contains at least two pairs of sequence and secondary structure. A sequence starts with ‘>’ and the sequence name. The next line contains the sequence data (FASTA format). The third line represents the secondary structure and consists of – . ( ) [ ] { } < > (Dot-Bracket Format).

Name
RNAStructAlignmentMLImplementationService
Documentation
http://bibiserv.techfak.uni-bielefeld.de/biodomws/webservice.html
Protocol
SOAP
WSDL
Endpoint
http://bibiwsserv.techfak.uni-bielefeld.de/biodomws/axis/RNAStructAlignmentML
Topic
Biology
Type
Tags
Description

The service converts and reverts aligned RNA sequences in alignedDotBracketFasta format to an RNAStructAlignmentML XMLDocument. AlignedDotBracketFasta is a format to [...]

Further information

The service converts and reverts aligned RNA sequences in alignedDotBracketFasta format to an RNAStructAlignmentML XMLDocument.
AlignedDotBracketFasta is a format to cobine multiple sequences with secondary structures in one string. It contains at least two pairs of sequence and secondary structure. A sequence starts with ‘>’ and the sequence name. The next line contains the sequence data (FASTA format). The third line represents the secondary structure and consists of – . ( ) [ ] { } < > (Dot-Bracket Format).

Original source
BioCatalogue

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