roseImplementationService
By aggregator | September 22, 2011
Rose (Random model Of Sequence Evolution) implements a new probabilistic model of the evolution of RNA, DNA, or protein-like sequences.
Guided by an evolutionary tree, a family of related sequences is created from a common ancestor sequence by insertion, deletion and substitution of characters. During this artificial evolutionary process, the `true’ history is logged and the `correct’ multiple sequence alignment is created simultaneously. The model also allows for varying rates of mutation within the sequences, making it possible to establish so-called sequence motifs. The data created by Rose are suitable for the evaluation of methods in multiple sequence alignment computation and the prediction of phylogenetic relationships.
- Name
- roseImplementationService
- Documentation
- http://bibiserv.techfak.uni-bielefeld.de/rose/webservice.html
- Protocol
- SOAP
- WSDL
- Endpoint
- http://bibiwsserv.techfak.uni-bielefeld.de/rose/axis/rosePort
- Topic
- Nucleotide Multiple Alignment, Phylogeny, Protein Multiple Alignment, Tree Inference
- Type
- Analysis
- Tags
- bioinformatics, DNA, protein, rna, sequence
- Description
Rose (Random model Of Sequence Evolution) implements a new probabilistic model of the evolution of RNA, DNA, or protein-like sequences. [...]
- Further information
Rose (Random model Of Sequence Evolution) implements a new probabilistic model of the evolution of RNA, DNA, or protein-like sequences.
Guided by an evolutionary tree, a family of related sequences is created from a common ancestor sequence by insertion, deletion and substitution of characters. During this artificial evolutionary process, the `true’ history is logged and the `correct’ multiple sequence alignment is created simultaneously. The model also allows for varying rates of mutation within the sequences, making it possible to establish so-called sequence motifs. The data created by Rose are suitable for the evaluation of methods in multiple sequence alignment computation and the prediction of phylogenetic relationships.- Original source
- BioCatalogue
