passtaImplementationService
By aggregator | September 22, 2011
Passta (Protein annotation by secondary-structure based alignment) helps to decide whether a protein sequence is related to a protein with known structure. Given a protein query, Passta tries to “explain” it with secondary structure elements (SSEs) from related SCOP protein domains. The approach is able to handle rearrangements and duplications, and it displays the results in an integrated fashion.
- Name
- passtaImplementationService
- Documentation
- http://bibiserv.techfak.uni-bielefeld.de/passta/webservice.html
- Protocol
- SOAP
- WSDL
- Endpoint
- http://bibiwsserv.techfak.uni-bielefeld.de/passta/axis/passtaPort
- Topic
- Protein Secondary Structure
- Type
- Analysis
- Tags
- alignment, bioinformatics, protein
- Description
Passta (Protein annotation by secondary-structure based alignment) helps to decide whether a protein sequence is related to a protein with [...]
- Further information
Passta (Protein annotation by secondary-structure based alignment) helps to decide whether a protein sequence is related to a protein with known structure. Given a protein query, Passta tries to “explain” it with secondary structure elements (SSEs) from related SCOP protein domains. The approach is able to handle rearrangements and duplications, and it displays the results in an integrated fashion.
- Original source
- BioCatalogue
