passtaImplementationService

By | September 22, 2011

Passta (Protein annotation by secondary-structure based alignment) helps to decide whether a protein sequence is related to a protein with known structure. Given a protein query, Passta tries to “explain” it with secondary structure elements (SSEs) from related SCOP protein domains. The approach is able to handle rearrangements and duplications, and it displays the results in an integrated fashion.

Name
passtaImplementationService
Documentation
http://bibiserv.techfak.uni-bielefeld.de/passta/webservice.html
Protocol
SOAP
WSDL
Endpoint
http://bibiwsserv.techfak.uni-bielefeld.de/passta/axis/passtaPort
Topic
Protein Secondary Structure
Type
Analysis
Tags
, ,
Description

Passta (Protein annotation by secondary-structure based alignment) helps to decide whether a protein sequence is related to a protein with [...]

Further information

Passta (Protein annotation by secondary-structure based alignment) helps to decide whether a protein sequence is related to a protein with known structure. Given a protein query, Passta tries to “explain” it with secondary structure elements (SSEs) from related SCOP protein domains. The approach is able to handle rearrangements and duplications, and it displays the results in an integrated fashion.

Original source
BioCatalogue

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