This is a Web service interface to the Jaspar database which contain profiles of transcription factor binding sites.
Profiles can be fetched as Position Frequency Matrices (PFM), Position Weight Matrices (PWM), or
Information Content Matrices (ICM).

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update. Bryne JC, Valen E, Tang MH, Marstrand T, Winther O, da Piedade I, Krogh A, Lenhard B, Sandelin A. Nucleic Acids Res. 2008 Jan;36(Database issue):D102-6. Epub 2007 Nov 15.

http://jaspar.genereg.net/

http://api.bioinfo.no/clients/JasparClient.java

http://api.bioinfo.no/clients/JasparClient.py

http://api.bioinfo.no/clients/JasparClient.pl

0.2 (beta service)

Name

Jaspar

Documentation

http://api.bioinfo.no/wsdl/JasparDB.wsdl

Protocol

SOAP

WSDL

Endpoint

http://api.bioinfo.no/services/JasparDB

Topic

Biology

Type

Tags

EMBRACE, molecular structure, nucleotide

Description

This is a Web service interface to the Jaspar database which contain profiles of transcription factor binding sites. Profiles can [...]

Further information

This is a Web service interface to the Jaspar database which contain profiles of transcription factor binding sites.
Profiles can be fetched as Position Frequency Matrices (PFM), Position Weight Matrices (PWM), or
Information Content Matrices (ICM).

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update. Bryne JC, Valen E, Tang MH, Marstrand T, Winther O, da Piedade I, Krogh A, Lenhard B, Sandelin A. Nucleic Acids Res. 2008 Jan;36(Database issue):D102-6. Epub 2007 Nov 15.

http://jaspar.genereg.net/

http://api.bioinfo.no/clients/JasparClient.java

http://api.bioinfo.no/clients/JasparClient.py

http://api.bioinfo.no/clients/JasparClient.pl

0.2 (beta service)

Original source

BioCatalogue

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