LoCo (Low-Complexity) Web-Service

By | September 22, 2011

LoCo (Low-Complexity Web Service)
The LoCo (Low-Complexity) web-service allows to search Low-complexity regions and tandem repeats in UniProt sequences.
There are three available methods: LCRegSearch, RepRegSearch, and RepSearch.
LCRegSearch returns UniProt entries with Low-Complexity regions that contain the queried string.
RepRegSearch returns UniProt entries with repeated regions that contain the queried string.
RepSearch returns UniProt entries with tandem repeats composed of the queried string.

Examples:

http://prints.cs.man.ac.uk/cgi-bin/loco?query=EP&service=LCRegSearch

http://prints.cs.man.ac.uk/cgi-bin/loco?query=EP&service=RepRegSearch

http://prints.cs.man.ac.uk/cgi-bin/loco?query=EP&service=RepSearch

Name
LoCo (Low-Complexity) Web-Service
Documentation
Protocol
REST
WSDL
Endpoint
http://prints.cs.man.ac.uk/cgi-bin/loco?
Topic
Biology
Type
Tags
, , ,
Description

LoCo (Low-Complexity Web Service) The LoCo (Low-Complexity) web-service allows to search Low-complexity regions and tandem repeats in UniProt sequences. There [...]

Further information

LoCo (Low-Complexity Web Service)
The LoCo (Low-Complexity) web-service allows to search Low-complexity regions and tandem repeats in UniProt sequences.
There are three available methods: LCRegSearch, RepRegSearch, and RepSearch.
LCRegSearch returns UniProt entries with Low-Complexity regions that contain the queried string.
RepRegSearch returns UniProt entries with repeated regions that contain the queried string.
RepSearch returns UniProt entries with tandem repeats composed of the queried string.

Examples:

http://prints.cs.man.ac.uk/cgi-bin/loco?query=EP&service=LCRegSearch

http://prints.cs.man.ac.uk/cgi-bin/loco?query=EP&service=RepRegSearch

http://prints.cs.man.ac.uk/cgi-bin/loco?query=EP&service=RepSearch

Original source
BioCatalogue

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