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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
Clustal Omega (SOAP)

Multiple sequence alignment using Clustal Omega.

Protein Multiple Alignment Analysis SOAP
ClustalW2 (REST)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST
ClustalW2 (SOAP)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
DbClustal (REST)

DbClustal is a ClustalW based alignment workflow for sequences identified by a protein BLAST (NCBI BLAST or WU-BLAST) search. Unlike [...]

Protein Multiple Alignment Analysis REST
DbClustal (SOAP)

DbClustal is a ClustalW based alignment workflow for sequences identified by a protein BLAST (NCBI BLAST or WU-BLAST) search. Unlike [...]

Protein Multiple Alignment Analysis SOAP
edialign Biology SOAP, Soaplab
EMBOSS edialign

Local multiple alignment of sequences

Biology SOAP, Soaplab
EMBOSS emma

Multiple sequence alignment (ClustalW wrapper)

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP, Soaplab
EMBOSS infoalign

Display basic information about a multiple sequence alignment

Biology SOAP, Soaplab
EMBOSS plotcon

Plot conservation of a sequence alignment

Biology SOAP, Soaplab
EMBOSS prettyplot

Draw a sequence alignment with pretty formatting

Biology SOAP, Soaplab
EMBOSS showalign

Display a multiple sequence alignment in pretty format

Biology SOAP, Soaplab
EMBOSS tranalign

Generate an alignment of nucleic coding regions from aligned proteins

Biology SOAP, Soaplab
emma Biology SOAP, Soaplab
infoalign Biology SOAP, Soaplab
Kalign (REST)

Kalign is a fast and accurate multiple sequence alignment algorithm for DNA and protein sequences.

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST
Kalign (SOAP)

Multiple sequence alignment using Kalign, a fast and accurate multiple sequence alignment algorithm. Kalign homepage: http://msa.sbc.su.se/

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
MAFFT (REST)

MAFFT (Multiple Alignment using Fast Fourier Transform) is a high speed multiple sequence alignment program.

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST
MAFFT (SOAP)

MAFFT (Multiple Alignment using Fast Fourier Transform) is a high speed multiple sequence alignment program.

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
MUSCLE (REST)

MUSCLE (MUltiple Sequence Comparison by Log-Expectation) is claimed to achieve both better average accuracy and better speed than ClustalW or [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST

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