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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
EMBOSS getorf

Finds and extracts open reading frames (ORFs)

Biology SOAP, Soaplab
EMBOSS marscan

Finds matrix/scaffold recognition (MRS) signatures in DNA sequences

Biology SOAP, Soaplab
EMBOSS plotorf

Plot potential open reading frames in a nucleotide sequence

Biology SOAP, Soaplab
EMBOSS showorf

Display a nucleotide sequence and translation in pretty format

Biology SOAP, Soaplab
EMBOSS tcode

Identify protein-coding regions using Fickett TESTCODE statistic

Biology SOAP, Soaplab
EMBOSS wobble

Plot third base position variability in a nucleotide sequence

Biology SOAP, Soaplab
getorf Biology SOAP, Soaplab
marscan Biology SOAP, Soaplab
plotorf Biology SOAP, Soaplab
showorf Biology SOAP, Soaplab
sixpack Biology SOAP, Soaplab
sixpackService

Display a DNA sequence with 6-frame translation and ORFs

Biology SOAP, Soaplab
syco Biology SOAP, Soaplab
sycoService

Draw synonymous codon usage statictic plot for a nucleotide sequence

Biology SOAP, Soaplab
tcode Biology SOAP, Soaplab
wobble Biology SOAP, Soaplab

Showing 1 to 16 of 16 entries

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