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Name	Short Description	Topic	Type	Protocol
Name	Short Description	Topic	Type	Protocol
EMBOSS vrnaalifold	RNA alignment folding	Biology		SOAP, Soaplab
EMBOSS vrnaalifoldpf	RNA alignment folding with partition	Biology		SOAP, Soaplab
EMBOSS vrnacofold	RNA cofolding	Biology		SOAP, Soaplab
EMBOSS vrnacofoldconc	RNA cofolding with concentrations	Biology		SOAP, Soaplab
EMBOSS vrnacofoldpf	RNA cofolding with partitioning	Biology		SOAP, Soaplab
EMBOSS vrnadistance	RNA distances	Biology		SOAP, Soaplab
EMBOSS vrnaduplex	RNA duplex calculation	Biology		SOAP, Soaplab
EMBOSS vrnaeval	RNA eval	Biology		SOAP, Soaplab
EMBOSS vrnaevalpair	RNA eval with cofold	Biology		SOAP, Soaplab
EMBOSS vrnafold	Calculate secondary structures of RNAs	Biology		SOAP, Soaplab
EMBOSS vrnafoldpf	Secondary structures of RNAs with partition	Biology		SOAP, Soaplab
EMBOSS vrnaheat	RNA melting	Biology		SOAP, Soaplab
EMBOSS vrnainverse	RNA sequences matching a structure	Biology		SOAP, Soaplab
EMBOSS vrnalfold	Calculate locally stable secondary structures of RNAs	Biology		SOAP, Soaplab
EMBOSS vrnaplot	Plot vrnafold output	Biology		SOAP, Soaplab
EMBOSS vrnasubopt	Calculate RNA suboptimals	Biology		SOAP, Soaplab
modeRNA	Service devoloped in Genesilico lab for homology modeling of RNA structures	Nucleotide Sequence Analysis, Nucleotide Tertiary Structure	Analysis	SOAP
vrnaalifold		Biology		SOAP, Soaplab
vrnaalifoldpf		Biology		SOAP, Soaplab
vrnacofold		Biology		SOAP, Soaplab