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NameShort DescriptionTopicTypeProtocol
NameShort DescriptionTopicTypeProtocol
ClustalW2 (REST)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis REST
ClustalW2 (SOAP)

ClustalW 2 is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
DCAImplementationService

Divide-and-Conquer Multiple Sequence Alignment (DCA) is a program for producing fast, high quality simultaneous multiple sequence alignments (http://bibiserv.techfak.uni-bielefeld.de/dca/alignments/) of amino [...]

Nucleotide Multiple Alignment, Protein Multiple Alignment Analysis SOAP
INB-dev:chirimoyo.ac.uma.es:runNCBIBlastp1

Authority: chirimoyo.ac.uma.es – Run NCBIBlast with default parameters from a fasta file

Biology SOAP
INB-dev:cnio.es:runCExonic

Authority: cnio.es – CExonic compares the conservation of exon structure between humans and other species. The method is applicable to [...]

Biology SOAP
INB-dev:cnio.es:runMBFromMSF

Authority: cnio.es – Automatic method for predicting functionally important residues (Mutational Behaviour) in protein sequence alignments (longer than 50 residues [...]

Biology SOAP
INB-dev:cnio.es:runPrank

Authority: cnio.es – PRANK (http://www.ebi.ac.uk/goldman-srv/prank/) is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. It is developed [...]

Biology SOAP
INB-dev:cnio.es:runS3det

Authority: cnio.es – S3det is based on a vectorial representation of the MSA in a high dimensional space. A reduction [...]

Biology SOAP
INB-dev:genome.imim.es:runCrossMatchToScreenVector

Authority: genome.imim.es – Runs cross_match to screen out vector sequences from a DNA sequence. The vector sequences dataset is stored [...]

Biology SOAP
INB-dev:genome.imim.es:runCrossMatchToScreenVectorCollection

Authority: genome.imim.es – Runs cross_match to screen out vector sequences from a set of DNA sequences. The vector sequences dataset [...]

Biology SOAP
INB-dev:inb.bsc.es:runPSIBlast

Authority: inb.bsc.es – Compares a protein sequence to a sequence database and calculates the statistical significance of matches using the [...]

Biology SOAP
INB-dev:inb.bsc.es:runPSIBlastXML

Authority: inb.bsc.es – Compares a protein sequence to a sequence database and calculates the statistical significance of matches using the [...]

Biology SOAP
INB-dev:inb.bsc.es:runRPSBlast

Authority: inb.bsc.es – RPS-BLAST (Reverse PSI-BLAST) searches a query sequence against a database of profiles.

Biology SOAP
INB-dev:inb.bsc.es:runTcoffeeFromProfiles

Authority: inb.bsc.es – Makes a profile alignment using Tcoffee.

Biology SOAP
INB-dev:java.inb.bsc.es:runNCBIBlastp

Authority: java.inb.bsc.es – Compares a protein sequence against a protein database and calculates the statistical significance of matches using the [...]

Biology SOAP
INB-dev:java.inb.bsc.es:runWUBlastp

Authority: java.inb.bsc.es – It compares an amino acid query sequence against a protein sequence database using the Washington University BLAST [...]

Biology SOAP
INB:cnio.es:runFASS

Authority: cnio.es – Automatic method for predicting functionally important residues in protein sequence alignments (longer than 50 residues and at [...]

Biology SOAP
INB:cnio.es:runFASSFromClustalw

Authority: cnio.es – Automatic method for predicting functionally important residues in protein sequence alignments (longer than 50 residues and at [...]

Biology SOAP
INB:cnio.es:runFASSFromMSF

Authority: cnio.es – Automatic method for predicting functionally important residues in protein sequence alignments (longer than 50 residues and at [...]

Biology SOAP
INB:cnio.es:runMB

Authority: cnio.es – Automatic method for predicting functionally important residues (Mutational Behaviour) in protein sequence alignments (longer than 50 residues [...]

Biology SOAP

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