Directory
| Name | Short Description | Topic | Type | Protocol |
|---|---|---|---|---|
| Name | Short Description | Topic | Type | Protocol |
| AnalysisServiceService | Nucleotide sequence similarity search using BLAST |
Nucleotide Sequence Similarity | Analysis | SOAP |
| AnalysisServiceService | Protein sequence similarity search using BLAST |
Protein Sequence Similarity | Analysis | SOAP |
| Bio2RDF NCBI GeneID SPARQL endpoint | Bio2RDF SOAP services for NCBI GeneID SPARQL endpoint |
Biology | SOAP | |
| Bio2RDF OMIM SPARQL endpoint | Bio2RDF SOAP services for OMIM SPARQL endpoint |
Biology | SOAP | |
| BLASTx at SIB (nucleotide query sequence(s) translated in all reading frames against a protein sequence database) | BLASTx finds regions of similarity between a nucleotide query sequence translated in all reading frames and a protein sequence database. [...] |
Protein Sequence Similarity | Analysis | SOAP |
| eFetchJournalsService | Note: Unfortunately this service cannot be used to retrieve records based on standardised NLM IDs or even better ISSNs. You [...] |
Biology | Literature | SOAP |
| eFetchNlmcService | Note: this service is poorly documented on the NCBI site like in there is no documentation at all. I tried [...] |
Biology | Literature | SOAP |
| eFetchOmimService | The EFetch services retrieve records in the requested format from several databases hosted by the NCBI. |
Biology | Literature | SOAP |
| eFetchPmcService | The EFetch services retrieve records in the requested format from several databases hosted by the NCBI. |
Biology | Literature | SOAP |
| eFetchPubmedService | The EFetch services retrieve records in the requested format from several databases hosted by the NCBI. |
Biology | Literature | SOAP |
| eUtils | Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may [...] |
Biology, General | Data Retrieval, Document Discovery, Identifier, Literature | SOAP |
| MegaBlast at SIB | megaBLAST finds regions of high similarity between a nucleotide query sequence and a nucleotide sequence database. Computations are done on [...] |
Nucleotide Sequence Similarity | Analysis | SOAP |
| megablastService | megaBLAST finds regions of high similarity between a nucleotide query sequence and a nucleotide sequence database |
Nucleotide Sequence Similarity | Analysis | SOAP |
| PSI-BLAST at SIB (protein query sequence against protein database, low similarity, iterative process) | psiBLAST finds regions of low similarity between peptides (Position-Specific Iterated BLAST). Computations are done on the Vital-IT cluster (SIB). Most [...] |
Protein Sequence Similarity | Analysis | SOAP |
| tBLASTn at SIB (protein query sequence(s) against a nucleotide sequence database dynamically translated in all reading frames) | tBLASTn finds regions of similarity between a protein query sequence and a nucleotide sequence database dynamically translated in all reading [...] |
Protein Sequence Similarity | Analysis | SOAP |
| tBLASTx at SIB (nucleotide query sequence(s) against a nucleotide sequence dabase, both six-frame translated) | tBLASTx finds regions of similarity between the six-frame translations of a nucleotide query sequence and the six-frame translations of a [...] |
Protein Sequence Similarity | Analysis | SOAP |
| WSNCBIBlast | WSNCBIBlast: NCBI BLAST sequence similarity searches (see http://www.ebi.ac.uk/Tools/webservices/services/ncbiblast). Note: this RPC/encoded SOAP service was decommissioned on Monday 28th March 2011, [...] |
Nucleotide Sequence Similarity, Protein Sequence Similarity | Analysis | SOAP |
