Directory
| Name | Short Description | Topic | Type | Protocol |
|---|---|---|---|---|
| Name | Short Description | Topic | Type | Protocol |
| BioMart – REST and SOAP | BioMart Soap Based Webservice version 0.1 |
Biology | Data Retrieval | SOAP |
| BLAST (DDBJ) | Uses the DDBJ’s UniProt BLAST service that forms part of its Web API for Bioinformatics pages. |
Nucleotide Sequence Similarity, Protein Sequence Similarity | Analysis | SOAP |
| BLAST blastp protein similarity search (CNRS IBCP) | Blast @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Sequence Similarity | Analysis | SOAP |
| BLASTatlas | This service creates maps of genome homology of a list of sequences against a reference genome using either blastp, blastn, [...] |
Nucleotide Sequence Similarity, Protein Sequence Similarity | Analysis | SOAP |
| blastProDom | Contact : Daniel Kahn, kahn@biomserv.univ-lyon1.fr Reference : Servant F, Bru C, Carrière S, Courcelle E, Gouzy J, Peyruc D, Kahn [...] |
Nucleotide Sequence Similarity, Protein Sequence Analysis | Analysis | SOAP |
| CATH/Gene3D Database Lookup Services | The CATH/Gene3D Database lookup service provides an interface that exposes the backend CATH/Gene3D databases to simple lookup queries. This enables [...] |
Biology, Domains, Pathways | Analysis, Data Retrieval | SOAP |
| CATH/Gene3D HMMScan (draft WSDL) | This service allows the CATH and Gene3D HMM libraries to be searched with a given amino acid sequence (or any [...] |
Protein Structure Prediction, Protein Tertiary Structure | Analysis | SOAP |
| CLUSTAL W multiple alignment (CNRS IBCP) | Clustalw @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Multiple Alignment | Analysis | SOAP |
| COILS predict protein coiled-coil regions (CNRS IBCP) | Coils @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Tertiary Structure | Analysis | SOAP |
| DSC protein secondary structure prediction (CNRS IBCP) | Dsc @ IBCP (http://gbio-pbil.ibcp.fr) |
Biology | SOAP | |
| ELMdb | — service_documentation: sample_client: __content__: http://api.bioinfo.no/clients/ELMdb.py reference: __content__: “ELM server: a new resource for investigating short functional sites in modular eukaryotic [...] |
Function Prediction, Ligand Interaction, Motifs, Pathways, Protein Interaction, Protein Sequence Analysis, Protein Sequence Similarity | Analysis | SOAP |
| FASTA protein similarity search (CNRS IBCP) | Fasta @ IBCP (http://gbio-pbil.ibcp.fr) |
Biology | SOAP | |
| FetchProDomService | fetchProDom is a set of five different webservices that interrogates the ProDom database. fetchdom: Enter one or several (separated by [...] |
Domains | Analysis | SOAP |
| FuncNet | FuncNet is a distributed protein function comparison pipeline, funded by the European Union’s EMBRACE Network of Excellence. The objective of [...] |
Function Prediction | Analysis | SOAP |
| GetEntry — Data retrieval by accession numbers etc — (DDBJ) | Service Description “getentry” provides an easy way to retrieve entries from various databases at DDBJ. Please see also the [...] |
Biology | Data Retrieval | SOAP |
| GlobPlot | This WSDL file describe the GlobPlot Web Service. It performs intrinsic protein disorder, domain and globularity prediction. GlobPlot: Exploring Protein [...] |
Domains | Analysis | SOAP |
| GOR I protein secondary structure prediction (CNRS IBCP) | GorI @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Secondary Structure | Analysis | SOAP |
| GOR III protein secondary structure prediction (CNRS IBCP) | GorIII @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Secondary Structure | Analysis | SOAP |
| Hogenom | HOGENOM is a database of homologous genes from fully sequenced organisms, structured under ACNUC sequence database management system. It allows [...] |
Biology | Data Retrieval | SOAP |
| Hogenom_evoscen | Hogenom_evoscen is a set of webservices allowing to browse Hogenom 4 evolutionary scenarios. It includes GetScenarioHogenom : takes an Hogenom [...] |
Biology | SOAP |
