Directory
| Name | Short Description | Topic | Type | Protocol |
|---|---|---|---|---|
| Name | Short Description | Topic | Type | Protocol |
| AnalysisServiceService | Nucleotide sequence similarity search using BLAST |
Nucleotide Sequence Similarity | Analysis | SOAP |
| AnalysisServiceService | Protein sequence similarity search using BLAST |
Protein Sequence Similarity | Analysis | SOAP |
| BLAST blastp protein similarity search (CNRS IBCP) | Blast @ IBCP (http://gbio-pbil.ibcp.fr) |
Protein Sequence Similarity | Analysis | SOAP |
| BLASTx at SIB (nucleotide query sequence(s) translated in all reading frames against a protein sequence database) | BLASTx finds regions of similarity between a nucleotide query sequence translated in all reading frames and a protein sequence database. [...] |
Protein Sequence Similarity | Analysis | SOAP |
| CATH/Gene3D HMMScan (draft WSDL) | This service allows the CATH and Gene3D HMM libraries to be searched with a given amino acid sequence (or any [...] |
Protein Structure Prediction, Protein Tertiary Structure | Analysis | SOAP |
| CATHEDRAL (Draft WSDL) | This service allows the CATH database to be searched by protein structure. NB This service is not currently active. It [...] |
Protein Structure Prediction, Protein Tertiary Structure | Analysis | SOAP |
| Find Similar BioModels | Model similarity search based on MIRIAM annotations. The result are BioModels similar the inserted BioModel id or the lists of [...] |
Biology, Pathways | Analysis, Model Analysis, System Engineering | REST |
| PSI-BLAST at SIB (protein query sequence against protein database, low similarity, iterative process) | psiBLAST finds regions of low similarity between peptides (Position-Specific Iterated BLAST). Computations are done on the Vital-IT cluster (SIB). Most [...] |
Protein Sequence Similarity | Analysis | SOAP |
| tBLASTn at SIB (protein query sequence(s) against a nucleotide sequence database dynamically translated in all reading frames) | tBLASTn finds regions of similarity between a protein query sequence and a nucleotide sequence database dynamically translated in all reading [...] |
Protein Sequence Similarity | Analysis | SOAP |
| tBLASTx at SIB (nucleotide query sequence(s) against a nucleotide sequence dabase, both six-frame translated) | tBLASTx finds regions of similarity between the six-frame translations of a nucleotide query sequence and the six-frame translations of a [...] |
Protein Sequence Similarity | Analysis | SOAP |
| WSWUBlast | WSWUBlast: sequence similarity searches using WU-BLAST (see http://www.ebi.ac.uk/Tools/webservices/services/wublast). Note: this RPC/encoded SOAP service was decommissioned on Monday 28th March 2011, [...] |
Nucleotide Sequence Analysis, Nucleotide Sequence Similarity, Protein Sequence Analysis, Protein Sequence Similarity | Analysis | SOAP |
