Hogenom

By | September 22, 2011

HOGENOM is a database of homologous genes from fully sequenced organisms, structured under ACNUC sequence database management system. It allows to select sets of homologous genes among species, and to visualize multiple alignments and phylogenetic trees.
It is also possible to search for orthologous genes in a wide range of taxons.

This webservice is a possible link between HOGENOM and ProDom. Enter an HOGENOM family ID (eg: HBG000450), only one at a time, and the web service will return the list of proteins (Uniprot accession number) contained in that family.

We have a perl script available to run this webservice from your computer. Please install SOAP Lite before.

Name
Hogenom
Documentation
http://prodom.prabi.fr/prodom/2006.1/documentation/hogenom.html
Protocol
SOAP
WSDL
Endpoint
http://prodom.prabi.fr/prodom/2006.1/cgi-bin/hogenom.pl
Topic
Biology
Type
Data Retrieval
Tags
, , , , , ,
Description

HOGENOM is a database of homologous genes from fully sequenced organisms, structured under ACNUC sequence database management system. It allows [...]

Further information

HOGENOM is a database of homologous genes from fully sequenced organisms, structured under ACNUC sequence database management system. It allows to select sets of homologous genes among species, and to visualize multiple alignments and phylogenetic trees.
It is also possible to search for orthologous genes in a wide range of taxons.

This webservice is a possible link between HOGENOM and ProDom. Enter an HOGENOM family ID (eg: HBG000450), only one at a time, and the web service will return the list of proteins (Uniprot accession number) contained in that family.

We have a perl script available to run this webservice from your computer. Please install SOAP Lite before.

Original source
BioCatalogue

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